GC content of sequences in a multi FASTA file — gc_content_file • baseq

Function to calculate GC content of sequences in a multi FASTA file and write the results to a new FASTA file

Usage

gc_content_file(input_file)

Arguments

input_file: A string indicating the path and name of the input multi-FASTA file

Examples

sample_file_path <- system.file("extdata", "sample_fa.fasta", package = "baseq")

clean_DNA_file(sample_file_path)
#> Cleaned sequences written to file 'C:/Users/BSL CTCRI/AppData/Local/Temp/RtmpYlDm86/temp_libpath49301e5117b7/baseq/extdata/sample_fa_clean.fasta'.